Genomic Location: not available for this species
NR annotation: CAB3996770.1, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase-like, partial [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB3996770.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| G5EFZ1 | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Caenorhabditis elegans OX=6239 GN=ipgm-1 PE=1 SV=1 |
| Q4VWF8 | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Brugia malayi OX=6279 GN=ipgm-1 PE=1 SV=1 |
| I6LDA6 | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Onchocerca volvulus OX=6282 GN=ipgm-1 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0003305 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01676 all species → | Metalloenzyme | Metalloenzyme superfamily | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR006124 all species → | Domain | Metalloenzyme | Interproscan |
| IPR017850 all species → | Homologous_superfamily | Alkaline-phosphatase-like, core domain superfamily | Interproscan |
| IPR005995 all species → | Family | Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR31637 all species → | 2,3-BISPHOSPHOGLYCERATE-INDEPENDENT PHOSPHOGLYCERATE MUTASE | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003824 all species → | Molecular Function | catalytic activity | Interproscan |
| GO:0046872 all species → | Molecular Function | metal ion binding | Interproscan |
| GO:0004619 all species → | Molecular Function | phosphoglycerate mutase activity | Interproscan |
| GO:0006007 all species → | Biological Process | glucose catabolic process | Interproscan |
| GO:0030145 all species → | Molecular Function | manganese ion binding | Interproscan |
| GO:0044262 all species → | Biological Process | obsolete cellular carbohydrate metabolic process | Interproscan |
| GO:0046537 all species → | Molecular Function | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K01304 | pcp; pyroglutamyl-peptidase | EC:3.4.19.3 | Peptidases and inhibitors | ko01002 | deepkoala |
Transcript abundance of CAB3996770.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
