Genomic Location: not available for this species
NR annotation: CAB3996801.1, Hypoxia-inducible factor 1-alpha inhibitor [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB3996801.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q9NWT6 | Hypoxia-inducible factor 1-alpha inhibitor OS=Homo sapiens OX=9606 GN=HIF1AN PE=1 SV=2 |
| Q8BLR9 | Hypoxia-inducible factor 1-alpha inhibitor OS=Mus musculus OX=10090 GN=Hif1an PE=1 SV=2 |
| P59723 | Hypoxia-inducible factor 1-alpha inhibitor OS=Danio rerio OX=7955 GN=hif1an PE=2 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0002182 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13621 all species → | Cupin_8 | Cupin-like domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR041667 all species → | Domain | Cupin-like domain 8 | Interproscan |
| IPR014710 all species → | Homologous_superfamily | RmlC-like jelly roll fold | Interproscan |
| IPR003347 all species → | Domain | JmjC domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12461 all species → | HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005634 all species → | Cellular Component | nucleus | Interproscan |
| GO:0005737 all species → | Cellular Component | cytoplasm | Interproscan |
| GO:0016706 all species → | Molecular Function | 2-oxoglutarate-dependent dioxygenase activity | Interproscan |
| GO:0036139 all species → | Molecular Function | peptidyl-histidine dioxygenase activity | Interproscan |
| GO:0036140 all species → | Molecular Function | [protein]-asparagine 3-dioxygenase activity | Interproscan |
| GO:0042265 all species → | Biological Process | obsolete peptidyl-asparagine hydroxylation | Interproscan |
| GO:0045746 all species → | Biological Process | negative regulation of Notch signaling pathway | Interproscan |
| GO:0071532 all species → | Molecular Function | ankyrin repeat binding | Interproscan |
CAB3996801.1.Transcript abundance of CAB3996801.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
