Genomic Location: not available for this species
NR annotation: CAB3997540.1, mitochondrial carnitine acylcarnitine carrier -like, partial [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB3997540.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q9Z2Z6 | Mitochondrial carnitine/acylcarnitine carrier protein OS=Mus musculus OX=10090 GN=Slc25a20 PE=1 SV=1 |
| P97521 | Mitochondrial carnitine/acylcarnitine carrier protein OS=Rattus norvegicus OX=10116 GN=Slc25a20 PE=1 SV=1 |
| O43772 | Mitochondrial carnitine/acylcarnitine carrier protein OS=Homo sapiens OX=9606 GN=SLC25A20 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0000470 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00153 all species → | Mito_carr | Mitochondrial carrier protein | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR023395 all species → | Homologous_superfamily | Mitochondrial carrier domain superfamily | Interproscan |
| IPR018108 all species → | Repeat | Mitochondrial substrate/solute carrier | Interproscan |
| IPR050567 all species → | Family | Mitochondrial Carrier | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45624 all species → | MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005740 all species → | Cellular Component | mitochondrial envelope | Interproscan |
| GO:0006810 all species → | Biological Process | transport | Interproscan |
| GO:0006839 all species → | Biological Process | mitochondrial transport | Interproscan |
| GO:0015227 all species → | Molecular Function | acyl carnitine transmembrane transporter activity | Interproscan |
| GO:0022857 all species → | Molecular Function | transmembrane transporter activity | Interproscan |
| GO:1902603 all species → | Biological Process | carnitine transmembrane transport | Interproscan |
CAB3997540.1.Transcript abundance of CAB3997540.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
