Detailed information of CAB3998148.1 in Paramuricea clavata

Genomic Location: pcla8_s003343:31654...32448
NR annotation: CAB3998148.1, DCN1 3 [Paramuricea clavata]
Species abbreviation PCLAV · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6DFA1DCN1-like protein 3 OS=Xenopus laevis OX=8355 GN=dcun1d3 PE=2 SV=1
A4IHK8DCN1-like protein 3 OS=Xenopus tropicalis OX=8364 GN=dcun1d3 PE=2 SV=1
Q5E9V1DCN1-like protein 3 OS=Bos taurus OX=9913 GN=DCUN1D3 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0010109 (this species only)
Ubiquitin familyE3|E3 activity|DCUN1 · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03556
all species →
Cullin_bindingCullin bindingFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005176
all species →
DomainPotentiating neddylation domainInterproscan
IPR014764
all species →
FamilyDefective-in-cullin neddylation proteinInterproscan
IPR042460
all species →
Homologous_superfamilyDCN1-like, PONY binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12281
all species →
RP42 RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000151
all species →
Cellular Componentubiquitin ligase complexInterproscan
GO:0031624
all species →
Molecular Functionubiquitin conjugating enzyme bindingInterproscan
GO:0032182
all species →
Molecular Functionubiquitin-like protein bindingInterproscan
GO:0045116
all species →
Biological Processprotein neddylationInterproscan
GO:0097602
all species →
Molecular Functioncullin family protein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for CAB3998148.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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