Genomic Location: not available for this species
NR annotation: CAB3998251.1, -S-isoprenylcysteine O-methyltransferase-like [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB3998251.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| O12947 | Protein-S-isoprenylcysteine O-methyltransferase OS=Xenopus laevis OX=8355 GN=icmt PE=1 SV=1 |
| D6WJ77 | Protein-S-isoprenylcysteine O-methyltransferase OS=Tribolium castaneum OX=7070 GN=ICMT PE=1 SV=1 |
| Q9EQK7 | Protein-S-isoprenylcysteine O-methyltransferase OS=Mus musculus OX=10090 GN=Icmt PE=2 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0007205 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF04140 all species → | ICMT | Isoprenylcysteine carboxyl methyltransferase (ICMT) family | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR025770 all species → | Family | Protein-S-isoprenylcysteine O-methyltransferase | Interproscan |
| IPR007269 all species → | Family | Isoprenylcysteine carboxyl methyltransferase | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12714 all species → | PROTEIN-S ISOPRENYLCYSTEINE O-METHYLTRANSFERASE | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0004671 all species → | Molecular Function | protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity | Interproscan |
| GO:0005783 all species → | Cellular Component | endoplasmic reticulum | Interproscan |
| GO:0006481 all species → | Biological Process | C-terminal protein methylation | Interproscan |
| GO:0016020 all species → | Cellular Component | membrane | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K00587 | ICMT, STE14; protein-S-isoprenylcysteine O-methyltransferase | EC:2.1.1.100 | Terpenoid backbone biosynthesis | ko00900 | deepkoala |
Transcript abundance of CAB3998251.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
