Gene detail

Detailed information of CAB3998391.1 in Paramuricea clavata

Genomic Location: :...
NR annotation: CAB3998391.1, sortilin-related receptor-like, partial [Paramuricea clavata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q98930	Sortilin-related receptor (Fragment) OS=Gallus gallus OX=9031 GN=SORL1 PE=2 SV=1
P0DSP1	Sortilin-related receptor OS=Rattus norvegicus OX=10116 GN=Sorl1 PE=1 SV=1
O88307	Sortilin-related receptor OS=Mus musculus OX=10090 GN=Sorl1 PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00058	Ldl_recept_b	Low-density lipoprotein receptor repeat class B	Repeat	Interproscan
PF15901	Sortilin_C	Sortilin, neurotensin receptor 3, C-terminal	Domain	Interproscan
PF15902	Sortilin-Vps10	Sortilin, neurotensin receptor 3,	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000033	Repeat	LDLR class B repeat	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR050310	Family	VPS10-related sortilin family receptors	Interproscan
IPR006581	Domain	VPS10	Interproscan
IPR011042	Homologous_superfamily	Six-bladed beta-propeller, TolB-like	Interproscan
IPR031777	Domain	Sortilin, C-terminal	Interproscan
IPR031778	Domain	Sortilin, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12106	SORTILIN RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005794	Cellular Component	Golgi apparatus	Interproscan
GO:0006892	Biological Process	post-Golgi vesicle-mediated transport	Interproscan
GO:0016021	Cellular Component	membrane	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan