Detailed information of CAB3999733.1 in Paramuricea clavata

Genomic Location: :...
NR annotation: CAB3999733.1, High mobility group 20A [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9P0W2SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related OS=Homo sapiens OX=9606 GN=HMG20B PE=1 SV=1
Q32L68SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related OS=Bos taurus OX=9913 GN=HMG20B PE=2 SV=1
Q9Z104SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related OS=Mus musculus OX=10090 GN=Hmg20b PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12171zf-C2H2_jazZinc-finger double-stranded RNA-bindingFamilyInterproscan
PF00505HMG_boxHMG (high mobility group) boxDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR022755DomainZinc finger, double-stranded RNA bindingInterproscan
IPR051965FamilyChromatin Regulation and Neuronal Gene ExpressionInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR009071DomainHigh mobility group box domainInterproscan
IPR003604DomainMatrin/U1-C-like, C2H2-type zinc fingerInterproscan
IPR036910Homologous_superfamilyHigh mobility group box domain superfamilyInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46040HIGH MOBILITY GROUP PROTEIN 2Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0010468Biological Processregulation of gene expressionInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

TOP