Genomic Location: not available for this species
NR annotation: CAB3999746.1, 4-hydroxyphenylpyruvate dioxygenase [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB3999746.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| P32755 | 4-hydroxyphenylpyruvate dioxygenase OS=Rattus norvegicus OX=10116 GN=Hpd PE=1 SV=3 |
| Q5BKL0 | 4-hydroxyphenylpyruvate dioxygenase OS=Xenopus tropicalis OX=8364 GN=hpd PE=2 SV=1 |
| Q6TGZ5 | 4-hydroxyphenylpyruvate dioxygenase OS=Danio rerio OX=7955 GN=hpd PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0004616 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00903 all species → | Glyoxalase | Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR004360 all species → | Domain | Glyoxalase/fosfomycin resistance/dioxygenase domain | Interproscan |
| IPR005956 all species → | Family | 4-hydroxyphenylpyruvate dioxygenase | Interproscan |
| IPR037523 all species → | Domain | Vicinal oxygen chelate (VOC) domain | Interproscan |
| IPR029068 all species → | Homologous_superfamily | Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | Interproscan |
| IPR041736 all species → | Domain | 4-hydroxyphenylpyruvate dioxygenase, N-terminal | Interproscan |
| IPR041735 all species → | Domain | 4-hydroxyphenylpyruvate dioxygenase, C-terminal | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11959 all species → | 4-HYDROXYPHENYLPYRUVATE DIOXYGENASE | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003868 all species → | Molecular Function | 4-hydroxyphenylpyruvate dioxygenase activity | Interproscan |
| GO:0009072 all species → | Biological Process | aromatic amino acid metabolic process | Interproscan |
| GO:0016701 all species → | Molecular Function | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | Interproscan |
| GO:0000139 all species → | Cellular Component | Golgi membrane | Interproscan |
| GO:0005789 all species → | Cellular Component | endoplasmic reticulum membrane | Interproscan |
| GO:0006572 all species → | Biological Process | tyrosine catabolic process | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K00457 | HPD, hppD; 4-hydroxyphenylpyruvate dioxygenase | EC:1.13.11.27 | Exosome | ko04147 | deepkoala |
Transcript abundance of CAB3999746.1 across 21 RNA-seq samples of Paramuricea clavata. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 6 | 158.56 | 228.58 | |
| apical branchlet · Temperature treatment at T0 | 6 | 5 | 139.24 | 234.32 | |
| apical branchlet · Temperature treatment at T25 | 5 | 3 | 48.22 | 147.42 | |
| apical branchlet · Control at T0 | 4 | 3 | 102.08 | 180.35 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
