Detailed information of CAB4000136.1 in Paramuricea clavata

Genomic Location: not available for this species
NR annotation: CAB4000136.1, Transmembrane and TPR repeat-containing 2 [Paramuricea clavata]
Species abbreviation PCLAV · all data for this species · gene families

 Sequence
No sequence record for CAB4000136.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8N394Protein O-mannosyl-transferase TMTC2 OS=Homo sapiens OX=9606 GN=TMTC2 PE=1 SV=1
Q56A06Protein O-mannosyl-transferase TMTC2 OS=Mus musculus OX=10090 GN=Tmtc2 PE=2 SV=1
Q6DCD5Protein O-mannosyl-transferase tmtc2 OS=Xenopus laevis OX=8355 GN=tmtc2 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000850 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00515
all species →
TPR_1Tetratricopeptide repeatRepeatInterproscan
PF13181
all species →
TPR_8Tetratricopeptide repeatRepeatInterproscan
PF08409
all species →
TMTC_DUF1736Protein O-mannosyl-transferase TMTC, DUF1736FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019734
all species →
RepeatTetratricopeptide repeatInterproscan
IPR011990
all species →
Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR052384
all species →
FamilyO-mannosyl-transferase TMTCInterproscan
IPR013618
all species →
DomainProtein O-mannosyl-transferase TMTC, DUF1736Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR44216
all species →
PROTEIN O-MANNOSYL-TRANSFERASE TMTC2Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0000030
all species →
Molecular Functionmannosyltransferase activityInterproscan
GO:0005789
all species →
Cellular Componentendoplasmic reticulum membraneInterproscan
GO:0035269
all species →
Biological Processprotein O-linked mannosylationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for CAB4000136.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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