Genomic Location: not available for this species
NR annotation: CAB4000171.1, Hypothetical predicted protein, partial [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB4000171.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q4FZX0 | DENN domain-containing protein 11 OS=Xenopus laevis OX=8355 GN=dennd11 PE=2 SV=1 |
| Q1LX49 | DENN domain-containing protein 11 OS=Danio rerio OX=7955 GN=dennd11 PE=3 SV=1 |
| A4D1U4 | DENN domain-containing protein 11 OS=Homo sapiens OX=9606 GN=DENND11 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0007175 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF09804 all species → | DENND11 | DENN domain-containing protein 11 | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR018626 all species → | Family | Protein LCHN/Anr2 | Interproscan |
| IPR037516 all species → | Domain | Tripartite DENN domain | Interproscan |
| IPR051731 all species → | Family | DENND11/AVL9 guanine nucleotide exchange factors | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR31017 all species → | LATE SECRETORY PATHWAY PROTEIN AVL9-RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005737 all species → | Cellular Component | cytoplasm | Interproscan |
CAB4000171.1.Transcript abundance of CAB4000171.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
