Detailed information of CAB4000305.1 in Paramuricea clavata

Genomic Location: pcla8_s003873:23...778
NR annotation: CAB4000305.1, Retrovirus-related Pol poly from transposon, partial [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P03360Gag-Pol polyprotein (Fragment) OS=Avian reticuloendotheliosis virus OX=11636 GN=pol PE=1 SV=2
P08361Gag-Pol polyprotein OS=Cas-Br-E murine leukemia virus OX=11792 GN=gag-pol PE=3 SV=2
P26808Gag-Pol polyprotein OS=Friend murine leukemia virus (isolate PVC-211) OX=11798 GN=pol PE=3 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR052160FamilyGypsy Retrotransposon Integrase-likeInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47266ENDONUCLEASE-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan

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