Genomic Location: not available for this species
NR annotation: CAB4000737.1, L-gulonolactone oxidase, partial [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB4000737.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| P58710 | L-gulonolactone oxidase OS=Mus musculus OX=10090 GN=Gulo PE=1 SV=3 |
| Q90YK3 | L-gulonolactone oxidase OS=Scyliorhinus torazame OX=75743 GN=GULO PE=2 SV=1 |
| Q3ZC33 | L-gulonolactone oxidase OS=Bos taurus OX=9913 GN=GULO PE=2 SV=3 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0005380 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01565 all species → | FAD_binding_4 | FAD binding domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR006094 all species → | Domain | FAD linked oxidase, N-terminal | Interproscan |
| IPR036318 all species → | Homologous_superfamily | FAD-binding, type PCMH-like superfamily | Interproscan |
| IPR016166 all species → | Domain | FAD-binding domain, PCMH-type | Interproscan |
| IPR016167 all species → | Homologous_superfamily | FAD-binding, type PCMH, subdomain 1 | Interproscan |
| IPR010031 all species → | Family | L-gulonolactone/D-arabinono-1,4-lactone oxidase-like | Interproscan |
| IPR016169 all species → | Homologous_superfamily | FAD-binding, type PCMH, subdomain 2 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR43762 all species → | L-GULONOLACTONE OXIDASE | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0050660 all species → | Molecular Function | flavin adenine dinucleotide binding | Interproscan |
| GO:0071949 all species → | Molecular Function | FAD binding | Interproscan |
| GO:0016491 all species → | Molecular Function | oxidoreductase activity | Interproscan |
| GO:0016899 all species → | Molecular Function | oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor | Interproscan |
CAB4000737.1.Transcript abundance of CAB4000737.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
