Gene detail

Detailed information of CAB4001069.1 in Paramuricea clavata

Genomic Location: not available for this species
NR annotation: CAB4001069.1, 39S ribosomal L23, mitochondrial-like [Paramuricea clavata]
Species abbreviation PCLAV · all data for this species · gene families

Sequence

No sequence record for CAB4001069.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O35972	Large ribosomal subunit protein uL23m OS=Mus musculus OX=10090 GN=Mrpl23 PE=1 SV=1
Q9W021	Large ribosomal subunit protein uL23m OS=Drosophila melanogaster OX=7227 GN=mRpL23 PE=2 SV=1
Q63750	Large ribosomal subunit protein uL23m OS=Rattus norvegicus OX=10116 GN=Mrpl23 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007738 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00276 all species →	Ribosomal_L23	Ribosomal protein L23	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013025 all species →	Family	Large ribosomal subunit protein uL23-like	Interproscan
IPR012678 all species →	Homologous_superfamily	Ribosomal protein uL23/eL15/eS24 core domain superfamily	Interproscan
IPR012677 all species →	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12059 all species →	RIBOSOMAL PROTEIN L23-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840 all species →	Cellular Component	ribosome	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan
GO:0005762 all species →	Cellular Component	mitochondrial large ribosomal subunit	Interproscan
GO:0032543 all species →	Biological Process	mitochondrial translation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02892	RP-L23, MRPL23, rplW; large subunit ribosomal protein L23	-	Ribosome	ko03011	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.