Gene detail

Detailed information of CAB4002093.1 in Paramuricea clavata

Genomic Location: :...
NR annotation: CAB4002093.1, pre-mRNA-processing factor 39-like isoform X2 [Paramuricea clavata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q8K2Z2	Pre-mRNA-processing factor 39 OS=Mus musculus OX=10090 GN=Prpf39 PE=1 SV=3
Q86UA1	Pre-mRNA-processing factor 39 OS=Homo sapiens OX=9606 GN=PRPF39 PE=1 SV=3
Q1JPZ7	Pre-mRNA-processing factor 39 OS=Danio rerio OX=7955 GN=prpf39 PE=2 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00891	Methyltransf_2	O-methyltransferase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029063	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR001077	Domain	O-methyltransferase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR17204	PRE-MRNA PROCESSING PROTEIN PRP39-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000243	Cellular Component	commitment complex	Interproscan
GO:0000395	Biological Process	mRNA 5'-splice site recognition	Interproscan
GO:0005685	Cellular Component	U1 snRNP	Interproscan
GO:0030627	Molecular Function	pre-mRNA 5'-splice site binding	Interproscan
GO:0071004	Cellular Component	U2-type prespliceosome	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0008171	Molecular Function	O-methyltransferase activity	Interproscan