Genomic Location: not available for this species
NR annotation: CAB4002321.1, eukaryotic translation initiation factor 3 subunit L-like [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB4002321.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| A7SDW5 | Eukaryotic translation initiation factor 3 subunit L OS=Nematostella vectensis OX=45351 GN=v1g169424 PE=3 SV=1 |
| Q7T2A5 | Eukaryotic translation initiation factor 3 subunit L OS=Danio rerio OX=7955 GN=eif3l PE=2 SV=1 |
| Q3ZCK1 | Eukaryotic translation initiation factor 3 subunit L OS=Bos taurus OX=9913 GN=EIF3L PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0005683 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF10255 all species → | Paf67 | RNA polymerase I-associated factor PAF67 | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR019382 all species → | Family | Translation initiation factor 3 complex subunit L | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13242 all species → | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003743 all species → | Molecular Function | translation initiation factor activity | Interproscan |
| GO:0005737 all species → | Cellular Component | cytoplasm | Interproscan |
| GO:0005852 all species → | Cellular Component | eukaryotic translation initiation factor 3 complex | Interproscan |
| GO:0006413 all species → | Biological Process | translational initiation | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K15029 | EIF3L; translation initiation factor 3 subunit L | - | Translation factors | ko03012 | deepkoala |
Transcript abundance of CAB4002321.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
