Detailed information of CAB4002334.1 in Paramuricea clavata

Genomic Location: not available for this species
NR annotation: CAB4002334.1, glutamate synthase [NADPH], partial [Paramuricea clavata]
Species abbreviation PCLAV · all data for this species · gene families

 Sequence
No sequence record for CAB4002334.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q03460Glutamate synthase [NADH], amyloplastic OS=Medicago sativa OX=3879 PE=1 SV=1
Q0JKD0Glutamate synthase 1 [NADH], chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0681900 PE=2 SV=1
Q9LV03Glutamate synthase 1 [NADH], chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GLT1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002031 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078
all species →
RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF04898
all species →
Glu_syn_centralGlutamate synthase central domainDomainInterproscan
PF03372
all species →
Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan
PF01645
all species →
Glu_synthaseConserved region in glutamate synthaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013785
all species →
Homologous_superfamilyAldolase-type TIM barrelInterproscan
IPR000477
all species →
DomainReverse transcriptase domainInterproscan
IPR051394
all species →
FamilyGlutamate SynthaseInterproscan
IPR006982
all species →
DomainGlutamate synthase, central-NInterproscan
IPR036691
all species →
Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR002932
all species →
DomainGlutamate synthase domainInterproscan
IPR005135
all species →
DomainEndonuclease/exonuclease/phosphataseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43100
all species →
GLUTAMATE SYNTHASE [NADPH] SMALL CHAINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006807
all species →
Biological Processobsolete nitrogen compound metabolic processInterproscan
GO:0015930
all species →
Molecular Functionglutamate synthase activityInterproscan
GO:0006537
all species →
Biological Processglutamate biosynthetic processInterproscan
GO:0016638
all species →
Molecular Functionoxidoreductase activity, acting on the CH-NH2 group of donorsInterproscan
GO:0003824
all species →
Molecular Functioncatalytic activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for CAB4002334.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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