Detailed information of CAB4002712.1 in Paramuricea clavata

Genomic Location: not available for this species
NR annotation: CAB4002712.1, Hypothetical predicted protein [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families

 Sequence
No sequence record for CAB4002712.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A0A1L8GXM0DNA repair protein RAD50.L OS=Xenopus laevis OX=8355 GN=rad50.L PE=1 SV=1
A0A1L8GVF0DNA repair protein RAD50.S OS=Xenopus laevis OX=8355 GN=rad50.S PE=1 SV=1
Q9JIL8DNA repair protein RAD50 OS=Rattus norvegicus OX=10116 GN=Rad50 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001857 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13476
all species →
AAA_23AAA domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417
all species →
Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR038729
all species →
DomainRad50/SbcC-type AAA domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR18867
all species →
RAD50Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006302
all species →
Biological Processdouble-strand break repairInterproscan
GO:0016887
all species →
Molecular FunctionATP hydrolysis activityInterproscan
GO:0000722
all species →
Biological Processtelomere maintenance via recombinationInterproscan
GO:0000794
all species →
Cellular Componentcondensed nuclear chromosomeInterproscan
GO:0003691
all species →
Molecular Functiondouble-stranded telomeric DNA bindingInterproscan
GO:0007004
all species →
Biological Processtelomere maintenance via telomeraseInterproscan
GO:0030870
all species →
Cellular ComponentMre11 complexInterproscan
GO:0032508
all species →
Biological ProcessDNA duplex unwindingInterproscan
GO:0043047
all species →
Molecular Functionsingle-stranded telomeric DNA bindingInterproscan
GO:0051880
all species →
Molecular FunctionG-quadruplex DNA bindingInterproscan
GO:0070192
all species →
Biological Processchromosome organization involved in meiotic cell cycleInterproscan
GO:0090305
all species →
Biological Processobsolete nucleic acid phosphodiester bond hydrolysisInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for CAB4002712.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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