Genomic Location: not available for this species
NR annotation: CAB4002786.1, V-type proton ATPase 116 kDa subunit a-like isoform X1 [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB4002786.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q9Z1G4 | V-type proton ATPase 116 kDa subunit a 1 OS=Mus musculus OX=10090 GN=Atp6v0a1 PE=1 SV=3 |
| P25286 | V-type proton ATPase 116 kDa subunit a 1 OS=Rattus norvegicus OX=10116 GN=Atp6v0a1 PE=1 SV=1 |
| Q93050 | V-type proton ATPase 116 kDa subunit a 1 OS=Homo sapiens OX=9606 GN=ATP6V0A1 PE=1 SV=3 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0001726 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01496 all species → | V_ATPase_I | V-type ATPase 116kDa subunit family | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR002490 all species → | Family | V-type ATPase, V0 complex, 116kDa subunit family | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11629 all species → | VACUOLAR PROTON ATPASES | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005886 all species → | Cellular Component | plasma membrane | Interproscan |
| GO:0007035 all species → | Biological Process | vacuolar acidification | Interproscan |
| GO:0016471 all species → | Cellular Component | vacuolar proton-transporting V-type ATPase complex | Interproscan |
| GO:0033179 all species → | Cellular Component | proton-transporting V-type ATPase, V0 domain | Interproscan |
| GO:0046961 all species → | Molecular Function | proton-transporting ATPase activity, rotational mechanism | Interproscan |
| GO:0051117 all species → | Molecular Function | ATPase binding | Interproscan |
| GO:1902600 all species → | Biological Process | proton transmembrane transport | Interproscan |
CAB4002786.1.Transcript abundance of CAB4002786.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
