Genomic Location: not available for this species
NR annotation: CAB4002843.1, ATP synthase subunit d, mitochondrial [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB4002843.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q9DCX2 | ATP synthase peripheral stalk subunit d, mitochondrial OS=Mus musculus OX=10090 GN=Atp5pd PE=1 SV=3 |
| P31399 | ATP synthase peripheral stalk subunit d, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5pd PE=1 SV=3 |
| Q24251 | ATP synthase subunit d, mitochondrial OS=Drosophila melanogaster OX=7227 GN=ATPsynD PE=2 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0007381 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF05873 all species → | Mt_ATP-synt_D | ATP synthase D chain, mitochondrial (ATP5H) | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR008689 all species → | Family | ATP synthase, F0 complex, subunit D, mitochondrial | Interproscan |
| IPR036228 all species → | Homologous_superfamily | ATP synthase, F0 complex, subunit D superfamily, mitochondrial | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12700 all species → | ATP SYNTHASE SUBUNIT D, MITOCHONDRIAL | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0000274 all species → | Cellular Component | obsolete mitochondrial proton-transporting ATP synthase, stator stalk | Interproscan |
| GO:0000276 all species → | Cellular Component | obsolete mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) | Interproscan |
| GO:0015078 all species → | Molecular Function | proton transmembrane transporter activity | Interproscan |
| GO:0015986 all species → | Biological Process | proton motive force-driven ATP synthesis | Interproscan |
| GO:0046933 all species → | Molecular Function | proton-transporting ATP synthase activity, rotational mechanism | Interproscan |
CAB4002843.1.Transcript abundance of CAB4002843.1 across 21 RNA-seq samples of Paramuricea clavata. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 5 | 157.28 | 293.02 | |
| apical branchlet · Temperature treatment at T0 | 6 | 6 | 216.33 | 352.79 | |
| apical branchlet · Temperature treatment at T25 | 5 | 4 | 101.31 | 245.96 | |
| apical branchlet · Control at T0 | 4 | 4 | 173.37 | 260.41 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
