Genomic Location: pcla8_s004643:29904...30749
NR annotation: CAB4003161.1, uncharacterized transposon-derived [Paramuricea clavata]
| CDS | ||||
| PACLA_8A003762 | ||||
| Transcript |
| rna-PACLA_8A003762 |
| Protein |
| CAB4003161.1 |
| Uniprot term | Description |
|---|---|
| J9VQZ0 | Chromatin-associated protein SWI6 OS=Cryptococcus neoformans var. grubii serotype A (strain H99 / ATCC 208821 / CBS 10515 / FGSC 9487) OX=235443 GN=SWI6 PE=1 SV=2 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00665 | rve | Integrase core domain | Domain | Interproscan |
| PF00385 | Chromo | Chromo (CHRromatin Organisation MOdifier) domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR016197 | Homologous_superfamily | Chromo-like domain superfamily | Interproscan |
| IPR001584 | Domain | Integrase, catalytic core | Interproscan |
| IPR023779 | Conserved_site | Chromo domain, conserved site | Interproscan |
| IPR000953 | Domain | Chromo/chromo shadow domain | Interproscan |
| IPR023780 | Domain | Chromo domain | Interproscan |
| IPR012337 | Homologous_superfamily | Ribonuclease H-like superfamily | Interproscan |
| IPR036397 | Homologous_superfamily | Ribonuclease H superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46585 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0015074 | Biological Process | DNA integration | Interproscan |
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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