Genomic Location: not available for this species
NR annotation: CAB4003296.1, ATP-dependent 6-phosphofructokinase-like isoform X1 [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB4003296.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| P52034 | ATP-dependent 6-phosphofructokinase OS=Drosophila melanogaster OX=7227 GN=Pfk PE=2 SV=2 |
| Q5R636 | ATP-dependent 6-phosphofructokinase, platelet type OS=Pongo abelii OX=9601 GN=PFKP PE=2 SV=1 |
| Q01813 | ATP-dependent 6-phosphofructokinase, platelet type OS=Homo sapiens OX=9606 GN=PFKP PE=1 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0003848 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00365 all species → | PFK | Phosphofructokinase | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000023 all species → | Domain | Phosphofructokinase domain | Interproscan |
| IPR015912 all species → | Conserved_site | Phosphofructokinase, conserved site | Interproscan |
| IPR009161 all species → | Family | ATP-dependent 6-phosphofructokinase, eukaryotic-type | Interproscan |
| IPR035966 all species → | Homologous_superfamily | Phosphofructokinase superfamily | Interproscan |
| IPR022953 all species → | Family | ATP-dependent 6-phosphofructokinase | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13697 all species → | PHOSPHOFRUCTOKINASE | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003872 all species → | Molecular Function | 6-phosphofructokinase activity | Interproscan |
| GO:0006096 all species → | Biological Process | glycolytic process | Interproscan |
| GO:0005524 all species → | Molecular Function | ATP binding | Interproscan |
| GO:0005945 all species → | Cellular Component | 6-phosphofructokinase complex | Interproscan |
| GO:0006002 all species → | Biological Process | fructose 6-phosphate metabolic process | Interproscan |
| GO:0016208 all species → | Molecular Function | AMP binding | Interproscan |
| GO:0030388 all species → | Biological Process | fructose 1,6-bisphosphate metabolic process | Interproscan |
| GO:0042802 all species → | Molecular Function | identical protein binding | Interproscan |
| GO:0048029 all species → | Molecular Function | monosaccharide binding | Interproscan |
| GO:0061621 all species → | Biological Process | canonical glycolysis | Interproscan |
| GO:0070095 all species → | Molecular Function | fructose-6-phosphate binding | Interproscan |
| GO:0005737 all species → | Cellular Component | cytoplasm | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K00850 | pfkA, PFK; 6-phosphofructokinase 1 | EC:2.7.1.11 | Messenger RNA biogenesis | ko03019 | deepkoala |
Transcript abundance of CAB4003296.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
