Genomic Location: not available for this species
NR annotation: CAB4003383.1, Hypothetical predicted protein [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB4003383.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q8TB37 | Iron-sulfur cluster transfer protein NUBPL OS=Homo sapiens OX=9606 GN=NUBPL PE=1 SV=3 |
| Q9CWD8 | Iron-sulfur cluster transfer protein NUBPL OS=Mus musculus OX=10090 GN=Nubpl PE=1 SV=2 |
| Q54F15 | Iron-sulfur cluster transfer protein NUBPL OS=Dictyostelium discoideum OX=44689 GN=nubpl PE=3 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0003071 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF10609 all species → | ParA | NUBPL iron-transfer P-loop NTPase | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR027417 all species → | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR044304 all species → | Family | Iron-sulfur protein NUBPL-like | Interproscan |
| IPR019591 all species → | Family | Mrp/NBP35 ATP-binding protein | Interproscan |
| IPR033756 all species → | Family | Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR42961 all species → | IRON-SULFUR PROTEIN NUBPL | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005524 all species → | Molecular Function | ATP binding | Interproscan |
| GO:0005739 all species → | Cellular Component | mitochondrion | Interproscan |
| GO:0016226 all species → | Biological Process | iron-sulfur cluster assembly | Interproscan |
| GO:0032981 all species → | Biological Process | mitochondrial respiratory chain complex I assembly | Interproscan |
| GO:0051536 all species → | Molecular Function | iron-sulfur cluster binding | Interproscan |
| GO:0051539 all species → | Molecular Function | 4 iron, 4 sulfur cluster binding | Interproscan |
| GO:0140663 all species → | Molecular Function | ATP-dependent FeS chaperone activity | Interproscan |
CAB4003383.1.Transcript abundance of CAB4003383.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
