Detailed information of CAB4003988.1 in Paramuricea clavata

Genomic Location: pcla8_s004872:16707...17024
NR annotation: CAB4003988.1, VRR-NUC domain-containing [Paramuricea clavata]
Species abbreviation PCLAV · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000739 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08774
all species →		VRR_NUCVRR-NUC domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011856
all species →		Homologous_superfamilytRNA endonuclease-like domain superfamilyInterproscan
IPR014883
all species →		DomainVRR-NUC domainInterproscan

 PANTHER
No PANTHER signature was detected for CAB4003988.1. This gene does have a gene model — the search simply returned no hit.
 Gene Ontology
GO termCategoryDescriptionSource
GO:0003676
all species →		Molecular Functionnucleic acid bindingInterproscan
GO:0016788
all species →		Molecular Functionhydrolase activity, acting on ester bondsInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for CAB4003988.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP