Detailed information of CAB4003994.1 in Paramuricea clavata

Genomic Location: not available for this species
NR annotation: CAB4003994.1, 26S proteasome non-ATPase regulatory subunit 1, partial [Paramuricea clavata]
Species abbreviation PCLAV · all data for this species · gene families

 Sequence
No sequence record for CAB4003994.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5R5S426S proteasome non-ATPase regulatory subunit 1 OS=Pongo abelii OX=9601 GN=PSMD1 PE=2 SV=1
Q5F41826S proteasome non-ATPase regulatory subunit 1 OS=Gallus gallus OX=9031 GN=PSMD1 PE=2 SV=1
Q9946026S proteasome non-ATPase regulatory subunit 1 OS=Homo sapiens OX=9606 GN=PSMD1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004541 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21505
all species →
RPN2_N26S proteasome subunit RPN2, N-terminal domainDomainInterproscan
PF01851
all species →
PC_repProteasome/cyclosome repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011989
all species →
Homologous_superfamilyArmadillo-like helicalInterproscan
IPR048570
all species →
Domain26S proteasome non-ATPase regulatory subunit 1/RPN2, N-terminal domainInterproscan
IPR002015
all species →
RepeatProteasome/cyclosome repeatInterproscan
IPR016024
all species →
Homologous_superfamilyArmadillo-type foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10943
all species →
26S PROTEASOME NON-ATPASE REGULATORY SUBUNITInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0008540
all species →
Cellular Componentproteasome regulatory particle, base subcomplexInterproscan
GO:0034515
all species →
Cellular Componentproteasome storage granuleInterproscan
GO:0043161
all species →
Biological Processproteasome-mediated ubiquitin-dependent protein catabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for CAB4003994.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP