Detailed information of CAB4004005.1 in Paramuricea clavata

Genomic Location: :...
NR annotation: CAB4004005.1, basement membrane-specific heparan sulfate proteoglycan core -like, partial [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q06561Basement membrane proteoglycan OS=Caenorhabditis elegans OX=6239 GN=unc-52 PE=1 SV=2
G5ECE3Laminin subunit alpha lam-3 OS=Caenorhabditis elegans OX=6239 GN=lam-3 PE=1 SV=1
Q60675Laminin subunit alpha-2 OS=Mus musculus OX=10090 GN=Lama2 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00053Laminin_EGFLaminin EGF domainDomainInterproscan
PF00052Laminin_BLaminin B (Domain IV)DomainInterproscan
PF13927Ig_3Immunoglobulin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002049DomainLaminin-type EGF domainInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR050440FamilyLaminin/Netrin Extracellular MatrixInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR000034DomainLaminin IVInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR007110DomainImmunoglobulin-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10574NETRIN/LAMININ-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0009887Biological Processanimal organ morphogenesisInterproscan
GO:0009888Biological Processtissue developmentInterproscan

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