Genomic Location: not available for this species
NR annotation: CAB4004049.1, Hypothetical predicted protein [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB4004049.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q14677 | Clathrin interactor 1 OS=Homo sapiens OX=9606 GN=CLINT1 PE=1 SV=1 |
| A7Z035 | Clathrin interactor 1 OS=Bos taurus OX=9913 GN=CLINT1 PE=2 SV=1 |
| Q99KN9 | Clathrin interactor 1 OS=Mus musculus OX=10090 GN=Clint1 PE=1 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0001929 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01417 all species → | ENTH | ENTH domain | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR008942 all species → | Homologous_superfamily | ENTH/VHS | Interproscan |
| IPR013809 all species → | Domain | ENTH domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12276 all species → | EPSIN/ENT-RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005543 all species → | Molecular Function | phospholipid binding | Interproscan |
| GO:0005768 all species → | Cellular Component | endosome | Interproscan |
| GO:0005886 all species → | Cellular Component | plasma membrane | Interproscan |
| GO:0006897 all species → | Biological Process | endocytosis | Interproscan |
| GO:0030125 all species → | Cellular Component | clathrin vesicle coat | Interproscan |
| GO:0030276 all species → | Molecular Function | clathrin binding | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K24721 | CLINT1, EPN4; clathrin interactor 1 | - | Membrane trafficking | ko04131 | deepkoala |
Transcript abundance of CAB4004049.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
