Detailed information of CAB4004467.1 in Paramuricea clavata

Genomic Location: :...
NR annotation: CAB4004467.1, alpha-actinin, sarcomeric-like isoform X2 [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
L7UZ85Alpha-actinin OS=Dermatophagoides farinae OX=6954 PE=1 SV=1
P05094Alpha-actinin-1 OS=Gallus gallus OX=9031 GN=ACTN1 PE=1 SV=3
Q9Z1P2Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00435SpectrinSpectrin repeatDomainInterproscan
PF08726EFhand_Ca_insenCa2+ insensitive EF handDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036872Homologous_superfamilyCH domain superfamilyInterproscan
IPR018159RepeatSpectrin/alpha-actininInterproscan
IPR002048DomainEF-hand domainInterproscan
IPR002017RepeatSpectrin repeatInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR014837DomainEF-hand, Ca insensitiveInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11915SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0030018Cellular ComponentZ discInterproscan
GO:0030036Biological Processactin cytoskeleton organizationInterproscan
GO:0030054Cellular Componentcell junctionInterproscan
GO:0030864Cellular Componentcortical actin cytoskeletonInterproscan
GO:0042995Cellular Componentcell projectionInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan
GO:0055001Biological Processmuscle cell developmentInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K05699ACTN1_4; actinin alpha 1/4-Exosomeko04147deepkoala

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