Genomic Location: not available for this species
NR annotation: CAB4004620.1, serine threonine tyrosine-interacting [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB4004620.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q4V7N3 | Serine/threonine/tyrosine-interacting protein A OS=Xenopus laevis OX=8355 GN=styx-a PE=2 SV=1 |
| Q5U593 | Serine/threonine/tyrosine-interacting protein B OS=Xenopus laevis OX=8355 GN=styx-b PE=2 SV=1 |
| Q60969 | Serine/threonine/tyrosine-interacting protein OS=Mus musculus OX=10090 GN=Styx PE=1 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0006859 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00782 all species → | DSPc | Dual specificity phosphatase, catalytic domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000340 all species → | Domain | Dual specificity phosphatase, catalytic domain | Interproscan |
| IPR029021 all species → | Homologous_superfamily | Protein-tyrosine phosphatase-like | Interproscan |
| IPR020422 all species → | Domain | Dual specificity protein phosphatase domain | Interproscan |
| IPR000387 all species → | Domain | Tyrosine-specific protein phosphatases domain | Interproscan |
| IPR052449 all species → | Family | Serine/Threonine/Tyrosine-Interacting Phosphatase | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46588 all species → | SERINE/THREONINE/TYROSINE-INTERACTING PROTEIN | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0016311 all species → | Biological Process | dephosphorylation | Interproscan |
| GO:0006470 all species → | Biological Process | protein dephosphorylation | Interproscan |
| GO:0005654 all species → | Cellular Component | nucleoplasm | Interproscan |
| GO:0005737 all species → | Cellular Component | cytoplasm | Interproscan |
| GO:0032091 all species → | Biological Process | negative regulation of protein binding | Interproscan |
| GO:0062026 all species → | Biological Process | negative regulation of SCF-dependent proteasomal ubiquitin-dependent catabolic process | Interproscan |
| GO:0070372 all species → | Biological Process | regulation of ERK1 and ERK2 cascade | Interproscan |
| GO:1990444 all species → | Molecular Function | F-box domain binding | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K18042 | STYX; serine/threonine/tyrosine-interacting protein | - | Protein phosphatases and associated proteins | ko01009 | deepkoala |
Transcript abundance of CAB4004620.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
