Detailed information of CAB4004895.1 in Paramuricea clavata

Genomic Location: not available for this species
NR annotation: CAB4004895.1, autophagy-related 16-1-like, partial [Paramuricea clavata]
Species abbreviation PCLAV · all data for this species · gene families

 Sequence
No sequence record for CAB4004895.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q676U5Autophagy-related protein 16-1 OS=Homo sapiens OX=9606 GN=ATG16L1 PE=1 SV=2
Q5RAC9Autophagy-related protein 16-1 OS=Pongo abelii OX=9601 GN=ATG16L1 PE=2 SV=1
Q8C0J2Autophagy-related protein 16-1 OS=Mus musculus OX=10090 GN=Atg16l1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005175 (this species only)
Ubiquitin familyUBD|Other|Beta-prp · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400
all species →		WD40WD domain, G-beta repeatRepeatInterproscan
PF08614
all species →		ATG16Autophagy protein 16 (ATG16)Coiled-coilInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015943
all species →		Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR001680
all species →		RepeatWD40 repeatInterproscan
IPR013923
all species →		DomainAutophagy-related protein 16 domainInterproscan
IPR036322
all species →		Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR045160
all species →		FamilyAutophagy-related protein 16Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19878
all species →		AUTOPHAGY PROTEIN 16-LIKEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0000045
all species →		Biological Processautophagosome assemblyInterproscan
GO:0000421
all species →		Cellular Componentautophagosome membraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for CAB4004895.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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