Gene detail

Detailed information of CAB4004993.1 in Paramuricea clavata

Genomic Location: not available for this species
NR annotation: CAB4004993.1, sodium myo-inositol cotransporter-like [Paramuricea clavata]
Species abbreviation PCLAV · all data for this species · gene families

Sequence

No sequence record for CAB4004993.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8VDT1	Sodium/glucose cotransporter 4 OS=Mus musculus OX=10090 GN=Slc5a9 PE=1 SV=3
P31637	Sodium/myo-inositol cotransporter OS=Canis lupus familiaris OX=9615 GN=SLC5A3 PE=1 SV=1
P53794	Sodium/myo-inositol cotransporter OS=Homo sapiens OX=9606 GN=SLC5A3 PE=1 SV=4

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006138 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00474 all species →	SSF	Sodium:solute symporter family	Family	Interproscan
PF16491 all species →	Peptidase_M48_N	CAAX prenyl protease N-terminal, five membrane helices	Domain	Interproscan
PF01435 all species →	Peptidase_M48	Peptidase family M48	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001734 all species →	Family	Sodium/solute symporter	Interproscan
IPR018212 all species →	Conserved_site	Sodium/solute symporter, conserved site	Interproscan
IPR032456 all species →	Domain	CAAX prenyl protease 1, N-terminal	Interproscan
IPR027057 all species →	Family	CAAX prenyl protease 1	Interproscan
IPR001915 all species →	Domain	Peptidase M48	Interproscan
IPR038377 all species →	Homologous_superfamily	Sodium/glucose symporter superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11819 all species →	SOLUTE CARRIER FAMILY 5	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0022857 all species →	Molecular Function	transmembrane transporter activity	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan
GO:0005412 all species →	Molecular Function	D-glucose:sodium symporter activity	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0016021 all species →	Cellular Component	membrane	Interproscan
GO:0008233 all species →	Molecular Function	peptidase activity	Interproscan
GO:0071586 all species →	Biological Process	CAAX-box protein processing	Interproscan
GO:0004222 all species →	Molecular Function	metalloendopeptidase activity	Interproscan
GO:0006508 all species →	Biological Process	proteolysis	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K06013	STE24; STE24 endopeptidase	EC:3.4.24.84	Exosome	ko04147	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.