Detailed information of CAB4005561.1 in Paramuricea clavata

Genomic Location: not available for this species
NR annotation: CAB4005561.1, DNA-dependent kinase catalytic subunit-like [Paramuricea clavata]
Species abbreviation PCLAV · all data for this species · gene families

 Sequence
No sequence record for CAB4005561.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8QGX4DNA-dependent protein kinase catalytic subunit OS=Gallus gallus OX=9031 GN=PRKDC PE=2 SV=1
Q8WN22DNA-dependent protein kinase catalytic subunit OS=Canis lupus familiaris OX=9615 GN=PRKDC PE=2 SV=1
Q9DEI1DNA-dependent protein kinase catalytic subunit OS=Xenopus laevis OX=8355 GN=prkdc PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001506 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08163
all species →		DNAPKcs_CC3DNA-dependent protein kinase catalytic subunit, CC3RepeatInterproscan
PF20502
all species →		DNAPKcs_CC1-2DNA-dependent protein kinase catalytic subunit, CC1/2RepeatInterproscan
PF20500
all species →		DNA-PKcs_NDNA-PKcs, N-terminalRepeatInterproscan
PF19704
all species →		DNAPKcs_CC5DNA-PKcs, CC5RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012582
all species →		DomainDNA-dependent protein kinase catalytic subunit, CC3Interproscan
IPR016024
all species →		Homologous_superfamilyArmadillo-type foldInterproscan
IPR046803
all species →		DomainDNA-dependent protein kinase catalytic subunit, CC1/2Interproscan
IPR046804
all species →		DomainDNA-PKcs, N-terminalInterproscan
IPR045581
all species →		DomainDNA-dependent protein kinase catalytic subunit, CC5Interproscan

 PANTHER
No PANTHER signature was detected for CAB4005561.1. This gene does have a gene model — the search simply returned no hit.
 Gene Ontology
GO termCategoryDescriptionSource
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006303
all species →		Biological Processdouble-strand break repair via nonhomologous end joiningInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for CAB4005561.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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