Genomic Location: not available for this species
NR annotation: CAB4006496.1, UDP-N-acetylhexosamine pyrophosphorylase-like isoform X1 [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB4006496.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q91YN5 | UDP-N-acetylhexosamine pyrophosphorylase OS=Mus musculus OX=10090 GN=Uap1 PE=1 SV=1 |
| Q16222 | UDP-N-acetylhexosamine pyrophosphorylase OS=Homo sapiens OX=9606 GN=UAP1 PE=1 SV=3 |
| Q7ZWD4 | UDP-N-acetylhexosamine pyrophosphorylase-like protein 1 OS=Danio rerio OX=7955 GN=uap1l1 PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0002601 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01704 all species → | UDPGP | UTP--glucose-1-phosphate uridylyltransferase | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR029044 all species → | Homologous_superfamily | Nucleotide-diphospho-sugar transferases | Interproscan |
| IPR002618 all species → | Family | UDPGP family | Interproscan |
| IPR039741 all species → | Family | UDP-sugar pyrophosphorylase | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11952 all species → | UDP- GLUCOSE PYROPHOSPHORYLASE | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0070569 all species → | Molecular Function | uridylyltransferase activity | Interproscan |
| GO:0003977 all species → | Molecular Function | UDP-N-acetylglucosamine diphosphorylase activity | Interproscan |
| GO:0006048 all species → | Biological Process | UDP-N-acetylglucosamine biosynthetic process | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K00972 | UAP1; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine diphosphorylase | EC:2.7.7.23 EC:2.7.7.83 | Amino sugar and nucleotide sugar metabolism | ko00520 | deepkoala |
Transcript abundance of CAB4006496.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
