Genomic Location: not available for this species
NR annotation: CAB4006730.1, dickkopf-related 3-like, partial [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB4006730.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0006573 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF04706 all species → | Dickkopf_N | Dickkopf N-terminal cysteine-rich region | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR039863 all species → | Family | Dickkopf related protein 1-4 | Interproscan |
| IPR006796 all species → | Domain | Dickkopf, N-terminal cysteine-rich | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12113 all species → | DICKKOPF3-LIKE 3 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005615 all species → | Cellular Component | extracellular space | Interproscan |
| GO:0039706 all species → | Molecular Function | co-receptor binding | Interproscan |
| GO:0048019 all species → | Molecular Function | receptor antagonist activity | Interproscan |
| GO:0090090 all species → | Biological Process | negative regulation of canonical Wnt signaling pathway | Interproscan |
| GO:0005576 all species → | Cellular Component | extracellular region | Interproscan |
| GO:0007275 all species → | Biological Process | multicellular organism development | Interproscan |
| GO:0030178 all species → | Biological Process | negative regulation of Wnt signaling pathway | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K25493 | DKK3; dickkopf 3 | - | Signaling proteins | - | deepkoala |
Transcript abundance of CAB4006730.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
