Gene detail

Detailed information of CAB4007393.1 in Paramuricea clavata

Genomic Location: pcla8_s005910:2310...4667
NR annotation: CAB4007393.1, Nuclear factor erythroid 2-related factor 1 [Paramuricea clavata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-PACLA_8A031753

GCCAATTGTCAGAATAAAACAAAATCTTGCATCATACGTCGATTGTCTGCTGAAAAAGGATACAAATCCCGCAAACAGAAGCCAATAAACCACTGAACATCAACATATTTCGTTTCCTATATTTCGCTAGTATTCTATACGTATTTATTCTGTTCTGTTCGGCGTATTTTTCCTTTGAAATCCCGGACTCCATGCCCGCTTTTGCCCCTGATTTCCCAATactgtccgccattttggacTTCGAACACAATCGAACTTATTGACCTGctgacgtcattgttgccaaGACATCGGCAGAAATTACGCAAATGGTGACGTCAACCAGCTATCGGACCAATGAATGGTCTAGAAGATTTAGTGTAATAATAGAAACATTATGTCATAGCAAGCCTATATAAGCGTTAAGCATTTCAGCTGAGTCACACAGTGTATTCATTTCGCAACAAACAGAGGAAGCTACAATAACCGAATGAGTTGGAACGATTCGAGCTTATAACGTTGCAATTACAGACATCAACACGgtgtattacaaaaatttactTCGCTTAAACAAGAAAGATTCAGCTATGACGGTAGGAATTCGAAGTCATCCGTATCAAGCCCAAAACGCAGCGAATATGTTGCAGTTTGGAAATATGTCAGCTGGGAAATCGCCATACGTCGTCGACGAGCAGACAGTACCACAAGCTTTATATCAGCCTCAAATGAACTCGTATAAAGACTTTCAACCGGATTTCCAAAATATGGATCCTTTGGCATACAACCAGTTGTATAATTCGCAAAGTTATCCTTCATATAACACTAACTTTATGGCATACCCTACTATATATCAGCCTGACTATAATAACACAAGCTCTGCAATGCAGGGCAATGAACATGCGACTCTGCGACAGAACTCGTTTCCACATGGTTCTCTTGACCAATTCCTTCCAGAATTTGACTATCAACAAGTGCTCGAGAATCTCGATTTAACTCCATACGAGAATCCAGAGTTGTTCTGCCTAGAGGATTATGCAAACCTGGAACAAGTCAATGAAGGAGTGAACTTTGATGGCGCAGTTAAGCAAGAGAAAGCTGATTGTGATAATACTGATTGTAAAAACCTCGAAGAATTGGAAAATGTATTGAACAATAACATTTTAAACGCGAACAATACTATGGTTAATGTTGTGACCACAGATTCACCAGTTAGTAATATTGGTGGTATAAATAATACAGTAAACATTAATAGTACCAATGACCAGACATTAGATgaacaaaatttgtttgatatactgGAAATGTACTCATCATCGGATTCTGTACAGTGGCAATCGACATCTAACTACTTACCAACTGGGAATCAAATGGTAGCTGGTGAGACCATAGTTAAAACTGAACCTAATACAAACAGTTGTGACTTTTTATTGCCTGGTAGTCCTGTCAGTATTAATACTGATGAAGGATTGTCAGCAATCGGAATACCAGATGAAGAACTCATACAGATGCCTGTGAGCAGATTTAATGACCTACTTTTATCGTTAACACCAGAACAATCCAACATTGCGAAGGATATTCGTAGGAAAGGAAAGAACAAGCAGGCAGCAAGATTATGTCGAAAGCGAAAGATTGATAATATATCTGCCTTGGAGGGTACACTTACACAGATGGAGGATGAGAAATCCAGACTTCTGAATGAACAGAAAGAAATTATTGCAGAAACTGAGGAACTGAAatcaaatattgaaatgatATGTGAGGTGCTGATGAAAGGATTAAATGGACAAAATATTGCATTATCTGAACTATCACTAGTACATCACTCTAATGGACAAACCTTGGttgttcaaaaataaaatatgtatttaaaaaataagttgatataatttataatatttcaGCAGTTGAACTGCACataatcagtggcgtaactactatgggctcagaccgtgaGAACTCGGGGGCCCCAAcctaaatgggggcccccaggcttaggcaatagagcaaaaacattggtcagggcctctgatatgttacaatgtagttttatgaccatcagaattctgtaaaatctctccccaaagtccaggaaatggcatttcagagagtctaaattcaaaaattttccggataagCATGCCCTGGCCCCCTAGAAAtttcgtgcatatacggcgctcgactcgtgcctttggcagatctactaggggggccccctgatataacgttacgccactgcacaTAATGTTAATTGTTTTGTAAGCATGGCTGGACCAAGcattttaaacatacaaaacatataaaaatacgtaatatttatttataatatttatacaaaataaaattatttattagAGAAATTGATTGTGTGTTGATTGTATA

Protein

Gene family

Gene family	Subfamily
Transcription Factors Family	TF_bZIP

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03131	bZIP_Maf	bZIP Maf transcription factor	Coiled-coil	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008917	Homologous_superfamily	Transcription factor, Skn-1-like, DNA-binding domain superfamily	Interproscan
IPR004826	Domain	Basic leucine zipper domain, Maf-type	Interproscan
IPR047167	Family	Nuclear Factor Erythroid-derived 2-like	Interproscan
IPR004827	Domain	Basic-leucine zipper domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24411	NUCLEAR FACTOR ERYTHROID 2-RELATED FACTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0003700	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan