Genomic Location: not available for this species
NR annotation: XP_028397017.1, transmembrane protein 258 [Dendronephthya gigantea]
Species Paramuricea clavata · all data for this species · gene families
CAB4007459.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q76LT9 | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit TMEM258 OS=Gallus gallus OX=9031 GN=TMEM258 PE=3 SV=1 |
| P61165 | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit TMEM258 OS=Homo sapiens OX=9606 GN=TMEM258 PE=1 SV=1 |
| P61166 | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit TMEM258 OS=Mus musculus OX=10090 GN=Tmem258 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0011382 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF05251 all species → | Ost5 | Oligosaccharyltransferase subunit 5 | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR007915 all species → | Family | Oligosaccharyltransferase complex subunit | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13636 all species → | UNCHARACTERIZED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0006487 all species → | Biological Process | protein N-linked glycosylation | Interproscan |
| GO:0032991 all species → | Cellular Component | protein-containing complex | Interproscan |
| GO:0034998 all species → | Cellular Component | obsolete oligosaccharyltransferase I complex | Interproscan |
| GO:0043227 all species → | Cellular Component | membrane-bounded organelle | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K26502 | TMEM258; transmembrane protein 258 | - | Protein processing in endoplasmic reticulum | ko04141 | deepkoala |
Transcript abundance of CAB4007459.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
