Detailed information of CAB4007947.1 in Paramuricea clavata

Genomic Location: not available for this species
NR annotation: CAB4007947.1, E3 ubiquitin- ligase HECTD1-like isoform X1 [Paramuricea clavata]
Species abbreviation PCLAV · all data for this species · gene families

 Sequence
No sequence record for CAB4007947.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9ULT8E3 ubiquitin-protein ligase HECTD1 OS=Homo sapiens OX=9606 GN=HECTD1 PE=1 SV=4
Q69ZR2E3 ubiquitin-protein ligase HECTD1 OS=Mus musculus OX=10090 GN=Hectd1 PE=1 SV=2
Q9VL06E3 ubiquitin-protein ligase Ufd4 OS=Drosophila melanogaster OX=7227 GN=Ufd4 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003326 (this species only)
Ubiquitin familyE3|E3 activity|HECT · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF18410
all species →
BTHBBasic tilted helix bundle domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035983
all species →
Homologous_superfamilyHECT, E3 ligase catalytic domainInterproscan
IPR000569
all species →
DomainHECT domainInterproscan
IPR045322
all species →
FamilyE3 ubiquitin-protein ligase HECTD1/TRIP12-likeInterproscan
IPR041200
all species →
DomainFKBP3, basic tilted helix bundle domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45670
all species →
E3 UBIQUITIN-PROTEIN LIGASE TRIP12Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004842
all species →
Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0000209
all species →
Biological Processprotein polyubiquitinationInterproscan
GO:0006511
all species →
Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0016607
all species →
Cellular Componentnuclear speckInterproscan
GO:0043161
all species →
Biological Processproteasome-mediated ubiquitin-dependent protein catabolic processInterproscan
GO:0048856
all species →
Biological Processanatomical structure developmentInterproscan
GO:0061630
all species →
Molecular Functionubiquitin protein ligase activityInterproscan
GO:0070534
all species →
Biological Processprotein K63-linked ubiquitinationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for CAB4007947.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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