Genomic Location: not available for this species
NR annotation: CAB4008113.1, ATP synthase subunit alpha, mitochondrial-like [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB4008113.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q5R546 | ATP synthase F(1) complex subunit alpha, mitochondrial OS=Pongo abelii OX=9601 GN=ATP5F1A PE=2 SV=1 |
| P25705 | ATP synthase F(1) complex subunit alpha, mitochondrial OS=Homo sapiens OX=9606 GN=ATP5F1A PE=1 SV=1 |
| A5A6H5 | ATP synthase F(1) complex subunit alpha, mitochondrial OS=Pan troglodytes OX=9598 GN=ATP5F1A PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0003945 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02874 all species → | ATP-synt_ab_N | ATP synthase alpha/beta family, beta-barrel domain | Domain | Interproscan |
| PF00006 all species → | ATP-synt_ab | ATP synthase alpha/beta family, nucleotide-binding domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR036121 all species → | Homologous_superfamily | ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily | Interproscan |
| IPR005294 all species → | Family | ATP synthase, F1 complex, alpha subunit | Interproscan |
| IPR033732 all species → | Domain | ATP synthase, F1 complex, alpha subunit nucleotide-binding domain | Interproscan |
| IPR020003 all species → | Active_site | ATPase, alpha/beta subunit, nucleotide-binding domain, active site | Interproscan |
| IPR027417 all species → | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR004100 all species → | Domain | ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain | Interproscan |
| IPR000194 all species → | Domain | ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain | Interproscan |
| IPR023366 all species → | Homologous_superfamily | ATP synthase subunit alpha, N-terminal domain-like superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR48082 all species → | ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0046034 all species → | Biological Process | ATP metabolic process | Interproscan |
| GO:1902600 all species → | Biological Process | proton transmembrane transport | Interproscan |
| GO:0015986 all species → | Biological Process | proton motive force-driven ATP synthesis | Interproscan |
| GO:0045261 all species → | Cellular Component | proton-transporting ATP synthase complex, catalytic core F(1) | Interproscan |
| GO:0046933 all species → | Molecular Function | proton-transporting ATP synthase activity, rotational mechanism | Interproscan |
| GO:0032559 all species → | Molecular Function | adenyl ribonucleotide binding | Interproscan |
| GO:0005524 all species → | Molecular Function | ATP binding | Interproscan |
| GO:0005754 all species → | Cellular Component | obsolete mitochondrial proton-transporting ATP synthase, catalytic core | Interproscan |
| GO:0043531 all species → | Molecular Function | ADP binding | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K02132 | ATPeF1A, ATP5A1, ATP1; F-type H+-transporting ATPase subunit alpha | - | Diabetic cardiomyopathy | ko05415 | deepkoala |
Transcript abundance of CAB4008113.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
