Gene detail

Detailed information of CAB4008844.1 in Paramuricea clavata

Genomic Location: :...
NR annotation: CAB4008844.1, Retrovirus-related Pol poly from transposon, partial [Paramuricea clavata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q70E20	Sushi, nidogen and EGF-like domain-containing protein 1 OS=Mus musculus OX=10090 GN=Sned1 PE=2 SV=2
Q5ZQU0	Sushi, nidogen and EGF-like domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Sned1 PE=2 SV=2
Q8TER0	Sushi, nidogen and EGF-like domain-containing protein 1 OS=Homo sapiens OX=9606 GN=SNED1 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF17917	RT_RNaseH	RNase H-like domain found in reverse transcriptase	Domain	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF03782	AMOP	AMOP domain	Domain	Interproscan
PF06119	NIDO	Nidogen-like	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003886	Domain	NIDO domain	Interproscan
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR014756	Homologous_superfamily	Immunoglobulin E-set	Interproscan
IPR041373	Domain	Reverse transcriptase, RNase H-like domain	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR051495	Family	Epithelial Barrier and Cell Signaling Protein	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR005533	Domain	AMOP domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13802	MUCIN 4-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0007160	Biological Process	cell-matrix adhesion	Interproscan
GO:0005615	Cellular Component	extracellular space	Interproscan