Genomic Location: not available for this species
NR annotation: CAB4008947.1, Hypothetical predicted protein, partial [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB4008947.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q9EP89 | Serine beta-lactamase-like protein LACTB, mitochondrial OS=Mus musculus OX=10090 GN=Lactb PE=1 SV=1 |
| P83111 | Serine beta-lactamase-like protein LACTB, mitochondrial OS=Homo sapiens OX=9606 GN=LACTB PE=1 SV=2 |
| P83095 | Serine beta-lactamase-like protein LACTB, mitochondrial OS=Bos taurus OX=9913 GN=LACTB PE=1 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0004050 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00144 all species → | Beta-lactamase | Beta-lactamase | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR012338 all species → | Homologous_superfamily | Beta-lactamase/transpeptidase-like | Interproscan |
| IPR052794 all species → | Family | Mitochondrial Serine Protease LACTB | Interproscan |
| IPR001466 all species → | Domain | Beta-lactamase-related | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46520 all species → | SERINE BETA-LACTAMASE-LIKE PROTEIN LACTB, MITOCHONDRIAL | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005739 all species → | Cellular Component | mitochondrion | Interproscan |
| GO:0006508 all species → | Biological Process | proteolysis | Interproscan |
| GO:0008233 all species → | Molecular Function | peptidase activity | Interproscan |
| GO:0019216 all species → | Biological Process | regulation of lipid metabolic process | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K17382 | LACTB; serine beta-lactamase-like protein LACTB, mitochondrial | - | Peptidases and inhibitors | ko01002 | deepkoala |
Transcript abundance of CAB4008947.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
