Genomic Location: not available for this species
NR annotation: CAB4009021.1, C-Jun-amino-terminal kinase-interacting 3 [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB4009021.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q58A65 | C-Jun-amino-terminal kinase-interacting protein 4 OS=Mus musculus OX=10090 GN=Spag9 PE=1 SV=2 |
| O60271 | C-Jun-amino-terminal kinase-interacting protein 4 OS=Homo sapiens OX=9606 GN=SPAG9 PE=1 SV=4 |
| Q9ESN9 | C-Jun-amino-terminal kinase-interacting protein 3 OS=Mus musculus OX=10090 GN=Mapk8ip3 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0005826 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF19056 all species → | WD40_2 | WD40 repeated domain | Repeat | Interproscan |
| PF16471 all species → | JIP_LZII | JNK-interacting protein leucine zipper II | Coiled-coil | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR036322 all species → | Homologous_superfamily | WD40-repeat-containing domain superfamily | Interproscan |
| IPR039911 all species → | Family | JNK-interacting protein 3/4 | Interproscan |
| IPR034744 all species → | Domain | RH2 domain | Interproscan |
| IPR032486 all species → | Domain | JNK-interacting protein, leucine zipper II | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13886 all species → | JNK/SAPK-ASSOCIATED PROTEIN | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0005078 all species → | Molecular Function | MAP-kinase scaffold activity | Interproscan |
| GO:0005737 all species → | Cellular Component | cytoplasm | Interproscan |
| GO:0008432 all species → | Molecular Function | JUN kinase binding | Interproscan |
| GO:0016192 all species → | Biological Process | vesicle-mediated transport | Interproscan |
| GO:0019894 all species → | Molecular Function | kinesin binding | Interproscan |
| GO:0030159 all species → | Molecular Function | signaling receptor complex adaptor activity | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K20317 | SPAG9, JIP4; c-Jun-amino-terminal kinase-interacting protein 4 | - | Membrane trafficking | ko04131 | deepkoala |
Transcript abundance of CAB4009021.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
