Detailed information of CAB4009604.1 in Paramuricea clavata

Genomic Location: not available for this species
NR annotation: CAB4009604.1, plastin-2 isoform X2 [Paramuricea clavata]
Species abbreviation PCLAV · all data for this species · gene families

 Sequence
No sequence record for CAB4009604.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O88818Plastin-3 OS=Cricetulus griseus OX=10029 GN=PLS3 PE=2 SV=3
A7E3Q8Plastin-3 OS=Bos taurus OX=9913 GN=PLS3 PE=2 SV=1
P13797Plastin-3 OS=Homo sapiens OX=9606 GN=PLS3 PE=1 SV=4
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001622 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13499
all species →
EF-hand_7EF-hand domain pairDomainInterproscan
PF00307
all species →
CHCalponin homology (CH) domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036872
all species →
Homologous_superfamilyCH domain superfamilyInterproscan
IPR001715
all species →
DomainCalponin homology domainInterproscan
IPR002048
all species →
DomainEF-hand domainInterproscan
IPR018247
all species →
Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR039959
all species →
FamilyFimbrin/PlastinInterproscan
IPR001589
all species →
Conserved_siteActinin-type actin-binding domain, conserved siteInterproscan
IPR011992
all species →
Homologous_superfamilyEF-hand domain pairInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19961
all species →
FIMBRIN/PLASTINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0005509
all species →
Molecular Functioncalcium ion bindingInterproscan
GO:0005737
all species →
Cellular ComponentcytoplasmInterproscan
GO:0005884
all species →
Cellular Componentactin filamentInterproscan
GO:0032432
all species →
Cellular Componentactin filament bundleInterproscan
GO:0051015
all species →
Molecular Functionactin filament bindingInterproscan
GO:0051017
all species →
Biological Processactin filament bundle assemblyInterproscan
GO:0051639
all species →
Biological Processactin filament network formationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K17275PLS1; plastin-1-Exosomeko04147deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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