Detailed information of CAB4009762.1 in Paramuricea clavata

Genomic Location: not available for this species
NR annotation: CAB4009762.1, SWI SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5- [Paramuricea clavata]
Species abbreviation PCLAV · all data for this species · gene families

 Sequence
No sequence record for CAB4009762.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q91ZW3SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 OS=Mus musculus OX=10090 GN=Smarca5 PE=1 SV=1
O60264SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 OS=Homo sapiens OX=9606 GN=SMARCA5 PE=1 SV=1
P28370SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 1 OS=Homo sapiens OX=9606 GN=SMARCA1 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000968 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09111
all species →		SLIDESLIDEDomainInterproscan
PF09110
all species →		HANDHANDDomainInterproscan
PF00249
all species →		Myb_DNA-bindingMyb-like DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001005
all species →		DomainSANT/Myb domainInterproscan
IPR015195
all species →		DomainSLIDE domainInterproscan
IPR009057
all species →		Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR036306
all species →		Homologous_superfamilyISWI, HAND domain superfamilyInterproscan
IPR015194
all species →		DomainISWI, HAND domainInterproscan
IPR017884
all species →		DomainSANT domainInterproscan

 PANTHER
No PANTHER signature was detected for CAB4009762.1. This gene does have a gene model — the search simply returned no hit.
 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006338
all species →		Biological Processchromatin remodelingInterproscan
GO:0031491
all species →		Molecular Functionnucleosome bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for CAB4009762.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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