Gene detail

Detailed information of CAB4010079.1 in Paramuricea clavata

Genomic Location: not available for this species
NR annotation: CAB4010079.1, Hypothetical predicted protein, partial [Paramuricea clavata]
Species abbreviation PCLAV · all data for this species · gene families

Sequence

No sequence record for CAB4010079.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O15027	Protein transport protein Sec16A OS=Homo sapiens OX=9606 GN=SEC16A PE=1 SV=4
E9QAT4	Protein transport protein Sec16A OS=Mus musculus OX=10090 GN=Sec16a PE=1 SV=1
Q6BCB4	Protein transport protein Sec16B OS=Oryctolagus cuniculus OX=9986 GN=SEC16B PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002424 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12931 all species →	Sec16_C	Sec23-binding domain of Sec16	Domain	Interproscan
PF12932 all species →	Sec16	Vesicle coat trafficking protein Sec16 mid-region	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR024880 all species →	Family	COPII coat assembly protein, Sec16	Interproscan
IPR024298 all species →	Domain	Ancestral coatomer element 1, Sec16/Sec31	Interproscan
IPR024340 all species →	Domain	Sec16, central conserved domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13402 all species →	RGPR-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006914 all species →	Biological Process	autophagy	Interproscan
GO:0007030 all species →	Biological Process	Golgi organization	Interproscan
GO:0012507 all species →	Cellular Component	ER to Golgi transport vesicle membrane	Interproscan
GO:0048208 all species →	Biological Process	COPII vesicle coating	Interproscan
GO:0070971 all species →	Cellular Component	endoplasmic reticulum exit site	Interproscan
GO:0070973 all species →	Biological Process	protein localization to endoplasmic reticulum exit site	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K20353	SEC16; COPII coat assembly protein SEC16	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.