Genomic Location: not available for this species
NR annotation: CAB4010105.1, Hypothetical predicted protein, partial [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB4010105.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q12980 | GATOR1 complex protein NPRL3 OS=Homo sapiens OX=9606 GN=NPRL3 PE=1 SV=1 |
| Q8VIJ8 | GATOR1 complex protein NPRL3 OS=Mus musculus OX=10090 GN=Nprl3 PE=1 SV=1 |
| Q9VUB4 | GATOR complex protein NPRL3 OS=Drosophila melanogaster OX=7227 GN=Nprl3 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0004337 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF03666 all species → | NPR3 | Nitrogen Permease regulator of amino acid transport activity 3 | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR005365 all species → | Family | Nitrogen permease regulator 3 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13153 all species → | CGTHBA PROTEIN -14 GENE PROTEIN | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0010508 all species → | Biological Process | positive regulation of autophagy | Interproscan |
| GO:0032007 all species → | Biological Process | negative regulation of TOR signaling | Interproscan |
| GO:0034198 all species → | Biological Process | cellular response to amino acid starvation | Interproscan |
| GO:0038202 all species → | Biological Process | TORC1 signaling | Interproscan |
| GO:1904262 all species → | Biological Process | negative regulation of TORC1 signaling | Interproscan |
| GO:1990130 all species → | Cellular Component | GATOR1 complex | Interproscan |
CAB4010105.1.Transcript abundance of CAB4010105.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
