Detailed information of CAB4010165.1 in Paramuricea clavata

Genomic Location: not available for this species
NR annotation: CAB4010165.1, Alpha-enolase, partial [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families

 Sequence
No sequence record for CAB4010165.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q27527Enolase OS=Caenorhabditis elegans OX=6239 GN=enol-1 PE=1 SV=3
P51913Alpha-enolase OS=Gallus gallus OX=9031 GN=ENO1 PE=2 SV=2
P06733Alpha-enolase OS=Homo sapiens OX=9606 GN=ENO1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002877 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03952
all species →
Enolase_NEnolase, N-terminal domainDomainInterproscan
PF00113
all species →
Enolase_CEnolase, C-terminal TIM barrel domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR020811
all species →
DomainEnolase, N-terminalInterproscan
IPR036849
all species →
Homologous_superfamilyEnolase-like, C-terminal domain superfamilyInterproscan
IPR029017
all species →
Homologous_superfamilyEnolase-like, N-terminalInterproscan
IPR000941
all species →
FamilyEnolaseInterproscan
IPR020810
all species →
DomainEnolase, C-terminal TIM barrel domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11902
all species →
ENOLASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000015
all species →
Cellular Componentphosphopyruvate hydratase complexInterproscan
GO:0000287
all species →
Molecular Functionmagnesium ion bindingInterproscan
GO:0004634
all species →
Molecular Functionphosphopyruvate hydratase activityInterproscan
GO:0006096
all species →
Biological Processglycolytic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K01689ENO1_2_3, eno; enolase 1/2/3EC:4.2.1.11
Exosomeko04147deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of CAB4010165.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

21Samples
0TPM > 0
4Conditions
0.0Max TPM
0.0Mean TPM

By condition

ConditionSamplesTPM > 0 Mean TPMMax TPMMean, relative to max
apical branchlet · Control at T25 6 0 0.00 0.00
apical branchlet · Temperature treatment at T0 6 0 0.00 0.00
apical branchlet · Temperature treatment at T25 5 0 0.00 0.00
apical branchlet · Control at T0 4 0 0.00 0.00

Per sample · hover a bar for the full sample record · show / hide the sample table

Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM, StringTie quantification over 21 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.

TOP