Genomic Location: not available for this species
NR annotation: CAB4010795.1, Alpha-parvin [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB4010795.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q9ES46 | Beta-parvin OS=Mus musculus OX=10090 GN=Parvb PE=1 SV=1 |
| Q9HBI1 | Beta-parvin OS=Homo sapiens OX=9606 GN=PARVB PE=1 SV=1 |
| Q9NVD7 | Alpha-parvin OS=Homo sapiens OX=9606 GN=PARVA PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0005368 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00307 all species → | CH | Calponin homology (CH) domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR036872 all species → | Homologous_superfamily | CH domain superfamily | Interproscan |
| IPR028433 all species → | Family | Parvin | Interproscan |
| IPR001715 all species → | Domain | Calponin homology domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12114 all species → | PARVIN | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003779 all species → | Molecular Function | actin binding | Interproscan |
| GO:0005737 all species → | Cellular Component | cytoplasm | Interproscan |
| GO:0005925 all species → | Cellular Component | focal adhesion | Interproscan |
| GO:0007155 all species → | Biological Process | cell adhesion | Interproscan |
| GO:0007163 all species → | Biological Process | establishment or maintenance of cell polarity | Interproscan |
| GO:0015629 all species → | Cellular Component | actin cytoskeleton | Interproscan |
| GO:0030031 all species → | Biological Process | cell projection assembly | Interproscan |
| GO:0030036 all species → | Biological Process | actin cytoskeleton organization | Interproscan |
| GO:0031532 all species → | Biological Process | obsolete actin cytoskeleton reorganization | Interproscan |
| GO:0034446 all species → | Biological Process | substrate adhesion-dependent cell spreading | Interproscan |
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
CAB4010795.1.Transcript abundance of CAB4010795.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
