Genomic Location: not available for this species
NR annotation: CAB4011346.1, Hypothetical predicted protein, partial [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB4011347.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q6IR70 | Protein phosphatase 1 regulatory subunit 21 OS=Xenopus laevis OX=8355 GN=ppp1r21 PE=2 SV=1 |
| Q6ZMI0 | Protein phosphatase 1 regulatory subunit 21 OS=Homo sapiens OX=9606 GN=PPP1R21 PE=1 SV=1 |
| Q5ZL12 | Protein phosphatase 1 regulatory subunit 21 OS=Gallus gallus OX=9031 GN=PPP1R21 PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0005706 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF10212 all species → | PPP1R21_helical | Protein phosphatase 1 regulatory subunit 21, six-helix bundle | Domain | Interproscan |
| PF10205 all species → | KLRAQ | Predicted coiled-coil domain-containing protein | Coiled-coil | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR040024 all species → | Family | Protein phosphatase 1 regulatory subunit 21 | Interproscan |
| IPR019348 all species → | Domain | Protein phosphatase 1 regulatory subunit 21, six-helix bundle | Interproscan |
| IPR019343 all species → | Domain | Protein phosphatase 1 regulatory subunit 21, N-terminal | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR21448 all species → | SMOOTH MUSCLE MYOSIN HEAVY CHAIN-RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005769 all species → | Cellular Component | early endosome | Interproscan |
| GO:0016020 all species → | Cellular Component | membrane | Interproscan |
CAB4011347.1.Transcript abundance of CAB4011347.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
