Detailed information of CAB4011806.1 in Paramuricea clavata

Genomic Location: not available for this species
NR annotation: CAB4011806.1, Squamous cell carcinoma antigen recognized by T-cells 3, partial [Paramuricea clavata]
Species abbreviation PCLAV · all data for this species · gene families

 Sequence
No sequence record for CAB4011806.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q15020Spliceosome associated factor 3, U4/U6 recycling protein OS=Homo sapiens OX=9606 GN=SART3 PE=1 SV=1
Q5REG1Spliceosome associated factor 3, U4/U6 recycling protein OS=Pongo abelii OX=9601 GN=SART3 PE=2 SV=2
Q9JLI8Spliceosome associated factor 3, U4/U6 recycling protein OS=Mus musculus OX=10090 GN=Sart3 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003669 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00076
all species →
RRM_1RNA recognition motifDomainInterproscan
PF05843
all species →
SufSuppressor of forked protein (Suf)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012677
all species →
Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR035979
all species →
Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR000504
all species →
DomainRNA recognition motif domainInterproscan
IPR011990
all species →
Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR034217
all species →
DomainSART3, RNA recognition motif 1Interproscan
IPR008847
all species →
DomainSuppressor of forkedInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15481
all species →
RIBONUCLEIC ACID BINDING PROTEIN S1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003676
all species →
Molecular Functionnucleic acid bindingInterproscan
GO:0003723
all species →
Molecular FunctionRNA bindingInterproscan
GO:0000398
all species →
Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0005654
all species →
Cellular ComponentnucleoplasmInterproscan
GO:0005737
all species →
Cellular ComponentcytoplasmInterproscan
GO:0061574
all species →
Cellular ComponentASAP complexInterproscan
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0006396
all species →
Biological ProcessRNA processingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for CAB4011806.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP