Gene detail

Detailed information of CAB4011951.1 in Paramuricea clavata

Genomic Location: not available for this species
NR annotation: CAB4011951.1, Intron-binding aquarius, partial [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families

Sequence

No sequence record for CAB4011951.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O60306	RNA helicase aquarius OS=Homo sapiens OX=9606 GN=AQR PE=1 SV=4
Q8CFQ3	RNA helicase aquarius OS=Mus musculus OX=10090 GN=Aqr PE=1 SV=2
P34243	DNA polymerase alpha-associated DNA helicase A OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=HCS1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003736 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF21144 all species →	Aquarius_N_3rd	Intron-binding protein aquarius insert domain	Domain	Interproscan
PF13086 all species →	AAA_11	AAA domain	Domain	Interproscan
PF16399 all species →	Aquarius_N_1st	Intron-binding protein aquarius N-terminal	Repeat	Interproscan
PF21143 all species →	Aquarius_N_2nd	Intron-binding protein aquarius, beta-barrel	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR048967 all species →	Domain	RNA helicase aquarius, insertion domain	Interproscan
IPR041677 all species →	Domain	DNA2/NAM7 helicase, helicase domain	Interproscan
IPR045055 all species →	Family	DNA2/NAM7-like helicase	Interproscan
IPR032174 all species →	Domain	RNA helicase aquarius, N-terminal domain	Interproscan
IPR048966 all species →	Domain	RNA helicase aquarius, beta-barrel	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10887 all species →	DNA2/NAM7 HELICASE FAMILY	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004386 all species →	Molecular Function	helicase activity	Interproscan
GO:0003729 all species →	Molecular Function	mRNA binding	Interproscan
GO:0071013 all species →	Cellular Component	catalytic step 2 spliceosome	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K12874	AQR; intron-binding protein aquarius	-	Spliceosome	ko03041	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.