Genomic Location: not available for this species
NR annotation: CAB4012062.1, Hypothetical predicted protein [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB4012062.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q5E965 | Transmembrane reductase CYB561D2 OS=Bos taurus OX=9913 GN=CYB561D2 PE=2 SV=1 |
| O14569 | Transmembrane reductase CYB561D2 OS=Homo sapiens OX=9606 GN=CYB561D2 PE=1 SV=1 |
| Q641Y1 | Transmembrane reductase CYB561D2 OS=Rattus norvegicus OX=10116 GN=Cyb561d2 PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0007314 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF03188 all species → | Cytochrom_B561 | Eukaryotic cytochrome b561 | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR045150 all species → | Family | Transmembrane reductase CYB561D1/2 | Interproscan |
| IPR006593 all species → | Domain | Cytochrome b561/ferric reductase transmembrane | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR15422 all species → | OS05G0565100 PROTEIN | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0016491 all species → | Molecular Function | oxidoreductase activity | Interproscan |
| GO:0020037 all species → | Molecular Function | heme binding | Interproscan |
| GO:0140575 all species → | Molecular Function | transmembrane monodehydroascorbate reductase activity | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K08371 | CYB561D2; transmembrane reductase | EC:7.2.1.3 | Transporters | ko02000 | deepkoala |
Transcript abundance of CAB4012062.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
